STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aocu_03830Flavin oxidoreductase/NADH oxidase. (333 aa)    
Predicted Functional Partners:
ald
Alanine dehydrogenase.
       0.737
Aocu_03850
Polyketide cylcase, SnoaL-like domain.
       0.711
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.560
adhE2
Bifunctional aldehyde/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.449
rpsA
30S ribosomal protein S1.
   
    0.443
Aocu_03820
Ferric uptake regulation protein FUR; Belongs to the Fur family.
  
    0.442
znuA
Zinc ABC transporter, periplasmic-binding protein ZnuA.
  
    0.418
znuB
Zinc ABC transporter, permease protein ZnuB.
  
    0.418
znuC
Zinc ABC transporter, ATP-binding protein ZnuC.
       0.413
Aocu_03870
Putative ABC transporter, periplasmatic-binding protein.
  
    0.409
Your Current Organism:
Acholeplasma oculi
NCBI taxonomy Id: 35623
Other names: A. oculi, ATCC 27350, Acholeplasma oculusi, NCTC 10150
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