STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW79855.1uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. (282 aa)    
Predicted Functional Partners:
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
 
 0.994
SDW42501.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
 
 
 0.984
cysC
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
 
  
 0.980
SDX45520.1
Sirohydrochlorin cobaltochelatase.
 
 0.970
SDX45437.1
Precorrin-2/cobalt-factor-2 C20-methyltransferase.
 
 
 0.959
SDX45409.1
Cobalt-precorrin 5A hydrolase / precorrin-3B C17-methyltransferase.
 
 0.931
SDW83875.1
Sulfite reductase (NADPH) hemoprotein beta-component.
 
  
 0.928
SDX83559.1
Porphobilinogen synthase; Belongs to the ALAD family.
 
 
 0.920
SDW83833.1
Phosophoadenylyl-sulfate reductase (thioredoxin).
 
  
 0.918
SDW74079.1
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
 
 0.883
Your Current Organism:
Albimonas donghaensis
NCBI taxonomy Id: 356660
Other names: A. donghaensis, Albimonas donghaensis Lim et al. 2008, DSM 17890, KCTC 12586, Paracoccus sp. DS2, strain DS2
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