Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| fdxB | trxB1 | OTBS_1101 | OTBS_0016 | Transposase and inactivated derivative. | Deoxyribodipyrimidine photo-lyase. | 0.748 |
| fdxB | trxB2 | OTBS_1101 | OTBS_1841 | Transposase and inactivated derivative. | Thioredoxin reductase. | 0.748 |
| folD | pheT | OTBS_1842 | OTBS_1140 | Methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.591 |
| folD | tdpX1 | OTBS_1842 | OTBS_1124 | Methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Thioredoxin peroxidase 1. | 0.559 |
| folD | tnE-10 | OTBS_1842 | OTBS_1379 | Methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Hypothetical protein. | 0.447 |
| folD | trxB2 | OTBS_1842 | OTBS_1841 | Methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Thioredoxin reductase. | 0.818 |
| pheT | folD | OTBS_1140 | OTBS_1842 | phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.591 |
| pheT | trxA | OTBS_1140 | OTBS_0434 | phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | RNA-directed DNA polymerase (Reverse transcriptase); Belongs to the thioredoxin family. | 0.406 |
| pheT | trxB1 | OTBS_1140 | OTBS_0016 | phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Deoxyribodipyrimidine photo-lyase. | 0.646 |
| pheT | trxB2 | OTBS_1140 | OTBS_1841 | phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Thioredoxin reductase. | 0.646 |
| tdpX1 | folD | OTBS_1124 | OTBS_1842 | Thioredoxin peroxidase 1. | Methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.559 |
| tdpX1 | tnA-9 | OTBS_1124 | OTBS_0841 | Thioredoxin peroxidase 1. | Transposase and inactivated derivative. | 0.583 |
| tdpX1 | tnB-9 | OTBS_1124 | OTBS_1503 | Thioredoxin peroxidase 1. | Transposase and inactivated derivative; Submitted as non-pseudo. | 0.583 |
| tdpX1 | traF-4 | OTBS_1124 | OTBS_1444 | Thioredoxin peroxidase 1. | Conjugative transfer protein. | 0.976 |
| tdpX1 | trxA | OTBS_1124 | OTBS_0434 | Thioredoxin peroxidase 1. | RNA-directed DNA polymerase (Reverse transcriptase); Belongs to the thioredoxin family. | 0.809 |
| tdpX1 | trxB1 | OTBS_1124 | OTBS_0016 | Thioredoxin peroxidase 1. | Deoxyribodipyrimidine photo-lyase. | 0.932 |
| tdpX1 | trxB2 | OTBS_1124 | OTBS_1841 | Thioredoxin peroxidase 1. | Thioredoxin reductase. | 0.922 |
| tnA-9 | tdpX1 | OTBS_0841 | OTBS_1124 | Transposase and inactivated derivative. | Thioredoxin peroxidase 1. | 0.583 |
| tnA-9 | tnB-9 | OTBS_0841 | OTBS_1503 | Transposase and inactivated derivative. | Transposase and inactivated derivative; Submitted as non-pseudo. | 0.881 |
| tnA-9 | tnE-10 | OTBS_0841 | OTBS_1379 | Transposase and inactivated derivative. | Hypothetical protein. | 0.927 |
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