STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPH_06031Ribonuclease III; Belongs to the helicase family. Dicer subfamily. (1533 aa)    
Predicted Functional Partners:
MPH_12121
Argonaute/Dicer protein PAZ.
   
 0.942
MPH_09162
Argonaute/Dicer protein PAZ.
   
 0.929
MPH_09580
Argonaute/Dicer protein PAZ.
   
 0.929
MPH_10262
Ribosomal protein S9.
   
 
 0.851
MPH_03723
Ribosomal protein L19.
  
 
 0.838
MPH_01188
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.834
MPH_11924
MRP-L46 domain-containing protein.
   
 
 0.831
MPH_00832
Ribosomal protein L32p.
  
   0.831
MPH_06276
Uncharacterized protein.
   
 
 0.831
MPH_07794
Ribosomal protein S16.
  
 
 0.828
Your Current Organism:
Macrophomina phaseolina
NCBI taxonomy Id: 1126212
Other names: M. phaseolina MS6, Macrophomina phaseolina MS6, Macrophomina phaseolina str. MS6, Macrophomina phaseolina strain MS6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.