STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO06008.1Hypothetical protein. (73 aa)    
Predicted Functional Partners:
KRO06663.1
Hypothetical protein.
  
     0.649
secE
Hypothetical protein; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
 
     0.606
KRO05556.1
Hypothetical protein.
  
     0.569
KRO05545.1
Hypothetical protein.
  
     0.496
KRO06894.1
Hypothetical protein.
  
     0.475
KRO06875.1
Hypothetical protein.
  
     0.429
KRO06009.1
Hypothetical protein.
       0.421
KRO06220.1
Metal-dependent membrane protease.
  
     0.417
KRO06126.1
Hypothetical protein.
  
     0.410
KRO06816.1
Hypothetical protein; Belongs to the HesB/IscA family.
  
     0.404
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.