STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2315KEGG: csa:Csal_2382 hypothetical protein. (259 aa)    
Predicted Functional Partners:
Ping_2316
PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ccr:CC1117 transcriptional regulator, LysR family.
 
     0.571
Ping_3427
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pub:SAR11_1302 substrate-binding region of ABC-type glycine betaine transport system.
  
     0.452
Ping_2026
PFAM: peptidase M24; KEGG: dps:DP1387 similar to dipeptidase.
 
     0.447
Ping_2125
KEGG: pcr:Pcryo_1812 hypothetical protein.
  
     0.445
Ping_0046
PFAM: regulatory protein GntR, HTH; KEGG: csa:Csal_0157 transcriptional regulator, GntR family.
  
     0.425
Ping_2031
PFAM: Asp/Glu racemase; KEGG: bcn:Bcen_6407 Asp/Glu racemase.
  
     0.419
Ping_0050
PFAM: protein of unknown function DUF81; KEGG: csa:Csal_0160 protein of unknown function DUF81.
  
     0.408
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.