Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABQ88628.1 | ABQ88629.1 | RoseRS_0192 | RoseRS_0193 | PFAM: transcriptional coactivator/pterin dehydratase. | Hypothetical protein. | 0.496 |
ABQ88628.1 | ABQ88630.1 | RoseRS_0192 | RoseRS_0194 | PFAM: transcriptional coactivator/pterin dehydratase. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.496 |
ABQ88628.1 | ABQ88905.1 | RoseRS_0192 | RoseRS_0480 | PFAM: transcriptional coactivator/pterin dehydratase. | methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase. | 0.549 |
ABQ88628.1 | ABQ91904.1 | RoseRS_0192 | RoseRS_3546 | PFAM: transcriptional coactivator/pterin dehydratase. | Hypothetical protein. | 0.900 |
ABQ88628.1 | ABQ92118.1 | RoseRS_0192 | RoseRS_3764 | PFAM: transcriptional coactivator/pterin dehydratase. | PFAM: Haloacid dehalogenase domain protein hydrolase. | 0.444 |
ABQ88628.1 | sigA | RoseRS_0192 | RoseRS_0191 | PFAM: transcriptional coactivator/pterin dehydratase. | RNA polymerase, sigma 70 subunit, RpoD family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.450 |
ABQ88629.1 | ABQ88628.1 | RoseRS_0193 | RoseRS_0192 | Hypothetical protein. | PFAM: transcriptional coactivator/pterin dehydratase. | 0.496 |
ABQ88629.1 | ABQ88630.1 | RoseRS_0193 | RoseRS_0194 | Hypothetical protein. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.815 |
ABQ88630.1 | ABQ88628.1 | RoseRS_0194 | RoseRS_0192 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | PFAM: transcriptional coactivator/pterin dehydratase. | 0.496 |
ABQ88630.1 | ABQ88629.1 | RoseRS_0194 | RoseRS_0193 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Hypothetical protein. | 0.815 |
ABQ88905.1 | ABQ88628.1 | RoseRS_0480 | RoseRS_0192 | methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase. | PFAM: transcriptional coactivator/pterin dehydratase. | 0.549 |
ABQ88905.1 | ABQ91904.1 | RoseRS_0480 | RoseRS_3546 | methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase. | Hypothetical protein. | 0.549 |
ABQ91904.1 | ABQ88628.1 | RoseRS_3546 | RoseRS_0192 | Hypothetical protein. | PFAM: transcriptional coactivator/pterin dehydratase. | 0.900 |
ABQ91904.1 | ABQ88905.1 | RoseRS_3546 | RoseRS_0480 | Hypothetical protein. | methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase. | 0.549 |
ABQ91904.1 | ABQ92118.1 | RoseRS_3546 | RoseRS_3764 | Hypothetical protein. | PFAM: Haloacid dehalogenase domain protein hydrolase. | 0.444 |
ABQ92118.1 | ABQ88628.1 | RoseRS_3764 | RoseRS_0192 | PFAM: Haloacid dehalogenase domain protein hydrolase. | PFAM: transcriptional coactivator/pterin dehydratase. | 0.444 |
ABQ92118.1 | ABQ91904.1 | RoseRS_3764 | RoseRS_3546 | PFAM: Haloacid dehalogenase domain protein hydrolase. | Hypothetical protein. | 0.444 |
sigA | ABQ88628.1 | RoseRS_0191 | RoseRS_0192 | RNA polymerase, sigma 70 subunit, RpoD family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | PFAM: transcriptional coactivator/pterin dehydratase. | 0.450 |