STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ89211.1PDZ/DHR/GLGF domain protein; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein. (303 aa)    
Predicted Functional Partners:
ABQ89212.1
PFAM: peptidase S1 and S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein.
 
    
0.677
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.657
ABQ91742.1
PFAM: protein kinase; TPR repeat-containing protein; WD-40 repeat protein; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; Tetratricopeptide domain protein.
  
 0.642
ABQ91273.1
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; XYPPX repeat-containing protein; phosphopantetheine-binding; KR.
  
 0.611
ABQ92239.1
PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase.
 
 
 0.549
ABQ89210.1
PFAM: Acetyl xylan esterase.
       0.526
ABQ89137.1
PFAM: Mov34/MPN/PAD-1 family protein.
   
  0.517
ABQ89369.1
Histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein.
  
  
 0.514
ABQ89513.1
PFAM: Dual specificity protein phosphatase.
  
 
 0.494
ABQ90043.1
PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase.
    
 0.487
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.