Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABQ88577.1 | menG | RoseRS_0139 | RoseRS_2185 | PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.569 |
ABQ88988.1 | ABQ89221.1 | RoseRS_0566 | RoseRS_0807 | Multimeric flavodoxin WrbA-like protein. | Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12. | 0.915 |
ABQ88988.1 | ABQ91153.1 | RoseRS_0566 | RoseRS_2782 | Multimeric flavodoxin WrbA-like protein. | Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12. | 0.900 |
ABQ88988.1 | menG | RoseRS_0566 | RoseRS_2185 | Multimeric flavodoxin WrbA-like protein. | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.900 |
ABQ89221.1 | ABQ88988.1 | RoseRS_0807 | RoseRS_0566 | Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12. | Multimeric flavodoxin WrbA-like protein. | 0.915 |
ABQ89221.1 | ABQ91153.1 | RoseRS_0807 | RoseRS_2782 | Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12. | Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12. | 0.943 |
ABQ89221.1 | menA | RoseRS_0807 | RoseRS_1492 | Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12. | 1,4-Dihydroxy-2-naphtoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK). | 0.905 |
ABQ89221.1 | menG | RoseRS_0807 | RoseRS_2185 | Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12. | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.920 |
ABQ89499.1 | ABQ91153.1 | RoseRS_1091 | RoseRS_2782 | PFAM: Methyltransferase type 11; Methyltransferase type 12. | Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12. | 0.651 |
ABQ89499.1 | menG | RoseRS_1091 | RoseRS_2185 | PFAM: Methyltransferase type 11; Methyltransferase type 12. | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.575 |
ABQ90564.1 | ABQ90567.1 | RoseRS_2184 | RoseRS_2187 | Hypothetical protein. | PFAM: Asparaginase/glutaminase. | 0.577 |
ABQ90564.1 | ABQ90568.1 | RoseRS_2184 | RoseRS_2188 | Hypothetical protein. | PFAM: Methyltransferase type 11; Methyltransferase type 12. | 0.515 |
ABQ90564.1 | coaX | RoseRS_2184 | RoseRS_2186 | Hypothetical protein. | Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family. | 0.741 |
ABQ90564.1 | menG | RoseRS_2184 | RoseRS_2185 | Hypothetical protein. | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.777 |
ABQ90567.1 | ABQ90564.1 | RoseRS_2187 | RoseRS_2184 | PFAM: Asparaginase/glutaminase. | Hypothetical protein. | 0.577 |
ABQ90567.1 | ABQ90568.1 | RoseRS_2187 | RoseRS_2188 | PFAM: Asparaginase/glutaminase. | PFAM: Methyltransferase type 11; Methyltransferase type 12. | 0.815 |
ABQ90567.1 | coaX | RoseRS_2187 | RoseRS_2186 | PFAM: Asparaginase/glutaminase. | Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family. | 0.594 |
ABQ90567.1 | menG | RoseRS_2187 | RoseRS_2185 | PFAM: Asparaginase/glutaminase. | Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.629 |
ABQ90568.1 | ABQ90564.1 | RoseRS_2188 | RoseRS_2184 | PFAM: Methyltransferase type 11; Methyltransferase type 12. | Hypothetical protein. | 0.515 |
ABQ90568.1 | ABQ90567.1 | RoseRS_2188 | RoseRS_2187 | PFAM: Methyltransferase type 11; Methyltransferase type 12. | PFAM: Asparaginase/glutaminase. | 0.815 |
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