STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ90939.1Hypothetical protein. (867 aa)    
Predicted Functional Partners:
ABQ91005.1
PFAM: protein of unknown function RIO1; protein kinase; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase.
  
 
 0.897
ABQ88952.1
Hypothetical protein.
 
   0.819
ABQ90581.1
ATPase involved in chromosome partitioning-like protein.
 
    0.803
ABQ90976.1
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase.
 
 
 0.797
ABQ91554.1
Hypothetical protein.
 
    0.787
ABQ88560.1
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein.
  
 
   0.782
ABQ90629.1
Hypothetical protein.
 
     0.780
ABQ89553.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
 
    0.779
ABQ90937.1
Glucose-6-P dehydrogenase subunit-like protein.
 
     0.778
ABQ89946.1
PFAM: alpha/beta hydrolase fold.
 
     0.774
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.