STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ91982.1PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase. (908 aa)    
Predicted Functional Partners:
ABQ92878.1
PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein.
   
 
 0.893
ABQ92194.1
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein, transpeptidase.
 
 
 
 0.785
ABQ92139.1
TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; Belongs to the SEDS family.
 
 
 
 0.750
ABQ89525.1
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein, transpeptidase.
 
 
 
 0.741
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
 
   
 0.730
ABQ92134.1
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain.
 
 
 
0.709
ABQ89684.1
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain.
 
 
 
0.705
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
  
   
 0.673
ABQ90728.1
PFAM: cell cycle protein; Belongs to the SEDS family.
 
 
 
 0.656
ABQ92957.1
PFAM: peptidase M23B.
  
   
 0.654
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.