STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ92821.1PFAM: periplasmic binding protein/LacI transcriptional regulator. (334 aa)    
Predicted Functional Partners:
ABQ91421.1
PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.984
ABQ91419.1
PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.981
ABQ91420.1
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.981
ABQ90686.1
Anti-sigma-factor antagonist; PFAM: periplasmic binding protein/LacI transcriptional regulator; Sulfate transporter/antisigma-factor antagonist STAS.
 
  
  0.975
ABQ90725.1
Histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein.
  
 
 0.968
ABQ91422.1
ABC-type sugar transport system periplasmic component-like protein.
  
  
 
0.929
rbsA
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system.
 
 
 0.928
ABQ89369.1
Histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein.
 
  
 
 0.922
ABQ91099.1
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.918
ABQ89269.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
   
 
 0.915
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.