STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_0220PFAM: glycoside hydrolase family 3 domain protein; KEGG: pdi:BDI_3104 glycoside hydrolase family 3, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 3 family. (721 aa)    
Predicted Functional Partners:
Cphy_3785
Alpha-glucosidase; PFAM: glycoside hydrolase family 31; KEGG: cpf:CPF_2648 glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.918
Cphy_2341
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: gka:GK0615 exo-alpha-1,4-glucosidase.
   
 
 0.903
Cphy_0430
Glycosyltransferase 36; PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: cth:Cthe_0275 glycosyltransferase 36.
    
 0.902
Cphy_0857
Cellobiose phosphorylase-like protein; KEGG: bhe:BH00920 cyclic beta 1-2 glucan synthetase.
    
 0.902
Cphy_3367
Cellulase; PFAM: glycoside hydrolase family 9; type 3a cellulose-binding domain protein; protein of unknown function DUF291; KEGG: csc:Csac_1076 glycoside hydrolase, family 48.
  
  
 0.840
Cphy_1596
PFAM: glycoside hydrolase family 3 domain protein; KEGG: pin:Ping_2107 glycoside hydrolase, family 3 domain protein.
  
  
 
0.752
Cphy_3329
PFAM: glycoside hydrolase family 3 domain protein; KEGG: bha:BH1908 glucan 1,4-beta-glucosidase.
  
  
 
0.744
Cphy_3009
PFAM: glycoside hydrolase family 3 domain protein; KEGG: cbe:Cbei_4674 glycoside hydrolase, family 3 domain protein.
  
  
 
0.741
Cphy_0699
PFAM: glycoside hydrolase family 3 domain protein; KEGG: efa:EF1238 glycosyl hydrolase, family 3; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.740
Cphy_0662
PFAM: glycoside hydrolase family 3 domain protein; KEGG: cth:Cthe_1256 glycoside hydrolase, family 3-like protein; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.706
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.