STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Cphy_2011Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: vei:Veis_1087 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (328 aa)    
Predicted Functional Partners:
rbsA
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.995
Cphy_2012
KEGG: bch:Bcen2424_5037 periplasmic binding protein/LacI transcriptional regulator.
 
 0.989
Cphy_2009
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ctc:CTC00907 D-ribose-binding periplasmic protein.
 
 0.985
Cphy_1132
KEGG: rle:RL0518 putative solute-binding component of ABC transporter.
 0.976
Cphy_1134
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE0763 ABC-type sugar (aldose) transport system, ATPase component.
 
 0.975
Cphy_3279
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE0763 ABC-type sugar (aldose) transport system, ATPase component.
 
 0.975
Cphy_2251
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ctc:CTC00907 D-ribose-binding periplasmic protein.
 
 0.972
Cphy_3277
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: tte:TTE0765 Periplasmic sugar-binding proteins.
 
 0.970
Cphy_3280
ABC-type sugar transport system ATPase component-like protein; KEGG: cpr:CPR_1601 ribose transport ATP-binding protein RbsA.
 
 0.958
Cphy_3278
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: cno:NT01CX_0163 ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.918
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.