STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_2058Cellulase; PFAM: glycoside hydrolase family 5; KEGG: cac:CAC0826 endoglucanase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (469 aa)    
Predicted Functional Partners:
Cphy_1163
Cellulase; PFAM: glycoside hydrolase family 5; KEGG: cth:Cthe_2872 glycoside hydrolase, family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 0.974
Cphy_3367
Cellulase; PFAM: glycoside hydrolase family 9; type 3a cellulose-binding domain protein; protein of unknown function DUF291; KEGG: csc:Csac_1076 glycoside hydrolase, family 48.
  
 0.965
Cphy_0430
Glycosyltransferase 36; PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: cth:Cthe_0275 glycosyltransferase 36.
 
  
 0.941
Cphy_3202
Cellulase; PFAM: glycoside hydrolase family 5; cellulose-binding family II; KEGG: bha:BH0603 endo-beta-1,4-glucanase (celulase B).
  
  
 
0.928
Cphy_0857
Cellobiose phosphorylase-like protein; KEGG: bhe:BH00920 cyclic beta 1-2 glucan synthetase.
 
  
 0.921
Cphy_1254
PFAM: lipolytic protein G-D-S-L family; KEGG: cth:Cthe_0797 glycoside hydrolase, family 5.
 
 
 0.840
Cphy_1612
PFAM: Pectate lyase/Amb allergen; KEGG: cac:CAC0804 pectate lyase related protein, secreted.
 
  
 0.779
Cphy_1071
PFAM: glycoside hydrolase family 26; type 3a cellulose-binding domain protein; Carbohydrate binding family 6; KEGG: chu:CHU_0353 CHU large protein; candidate b-mannanase, glycoside hydrolase family 26 protein; Belongs to the glycosyl hydrolase 26 family.
 
  
 0.778
Cphy_0624
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; Carbohydrate-binding CenC domain protein; KEGG: cth:Cthe_1838 glycoside hydrolase, family 10.
 
   
 0.772
Cphy_1510
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: cth:Cthe_0912 glycoside hydrolase, family 10.
 
   
 0.768
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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