STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAH42029.1Hypothetical protein. (287 aa)    
Predicted Functional Partners:
prkC
Serine/threonine-protein kinase.
  
 
 0.902
rsmB
Probable ribosomal RNA small subunit methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
 
 0.803
lgrA
Linear pentadecapeptide gramicidin synthetase LgrA.
  
   0.654
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.652
BAH43059.1
Hypothetical protein.
  
   
 0.638
BAH41089.1
Hypothetical protein.
  
     0.628
BAH42799.1
Hypothetical protein.
  
  
 0.615
BAH42806.1
Hypothetical protein.
  
     0.611
pbpB
Penicillin binding protein.
  
 
 0.609
BAH45045.1
Hypothetical protein.
  
     0.607
Your Current Organism:
Brevibacillus brevis
NCBI taxonomy Id: 358681
Other names: B. brevis NBRC 100599, Brevibacillus brevis NBRC 100599, Brevibacillus brevis str. NBRC 100599, Brevibacillus brevis strain NBRC 100599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.