STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAH42551.1Conserved hypothetical protein. (236 aa)    
Predicted Functional Partners:
paiB
Protease synthase and sporulation protein.
  
  
 0.872
BAH42552.1
Putative amino acid efflux protein.
       0.696
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
      0.682
argS
arginyl-tRNA synthetase.
    
 0.637
yhzB
Conserved hypothetical protein.
  
     0.590
BAH45511.1
Putative aminotransferase.
  
     0.540
yisU
Conserved hypothetical protein.
  
    0.528
BAH45486.1
Carbamate kinase-like protein; Belongs to the carbamate kinase family.
 
     0.510
BAH41332.1
Conserved hypothetical protein; Belongs to the HesB/IscA family.
  
     0.468
BAH42554.1
Probable transcriptional regulator.
       0.430
Your Current Organism:
Brevibacillus brevis
NCBI taxonomy Id: 358681
Other names: B. brevis NBRC 100599, Brevibacillus brevis NBRC 100599, Brevibacillus brevis str. NBRC 100599, Brevibacillus brevis strain NBRC 100599
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