Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAH43472.1 | BAH43475.1 | BBR47_24950 | BBR47_24980 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.860 |
BAH43472.1 | BAH43476.1 | BBR47_24950 | BBR47_24990 | Conserved hypothetical protein. | Probable glycosyltransferase. | 0.770 |
BAH43472.1 | birA | BBR47_24950 | BBR47_25010 | Conserved hypothetical protein. | BirA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.599 |
BAH43472.1 | cca | BBR47_24950 | BBR47_25000 | Conserved hypothetical protein. | Probable tRNA CCA-adding enzyme. | 0.713 |
BAH43472.1 | dapB | BBR47_24950 | BBR47_24960 | Conserved hypothetical protein. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.959 |
BAH43472.1 | mgsA | BBR47_24950 | BBR47_24970 | Conserved hypothetical protein. | Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. | 0.932 |
BAH43475.1 | BAH43472.1 | BBR47_24980 | BBR47_24950 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.860 |
BAH43475.1 | BAH43476.1 | BBR47_24980 | BBR47_24990 | Conserved hypothetical protein. | Probable glycosyltransferase. | 0.975 |
BAH43475.1 | birA | BBR47_24980 | BBR47_25010 | Conserved hypothetical protein. | BirA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.783 |
BAH43475.1 | cca | BBR47_24980 | BBR47_25000 | Conserved hypothetical protein. | Probable tRNA CCA-adding enzyme. | 0.945 |
BAH43475.1 | dapB | BBR47_24980 | BBR47_24960 | Conserved hypothetical protein. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.929 |
BAH43475.1 | mgsA | BBR47_24980 | BBR47_24970 | Conserved hypothetical protein. | Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. | 0.975 |
BAH43476.1 | BAH43472.1 | BBR47_24990 | BBR47_24950 | Probable glycosyltransferase. | Conserved hypothetical protein. | 0.770 |
BAH43476.1 | BAH43475.1 | BBR47_24990 | BBR47_24980 | Probable glycosyltransferase. | Conserved hypothetical protein. | 0.975 |
BAH43476.1 | birA | BBR47_24990 | BBR47_25010 | Probable glycosyltransferase. | BirA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.782 |
BAH43476.1 | cca | BBR47_24990 | BBR47_25000 | Probable glycosyltransferase. | Probable tRNA CCA-adding enzyme. | 0.828 |
BAH43476.1 | dapB | BBR47_24990 | BBR47_24960 | Probable glycosyltransferase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.820 |
BAH43476.1 | mgsA | BBR47_24990 | BBR47_24970 | Probable glycosyltransferase. | Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. | 0.903 |
BAH45182.1 | BAH45553.1 | BBR47_42050 | BBR47_45760 | Probable 2,5-diketo-D-gluconic acid reductase. | Probable 2,5-diketo-D-gluconic acid reductase. | 0.902 |
BAH45182.1 | mgsA | BBR47_42050 | BBR47_24970 | Probable 2,5-diketo-D-gluconic acid reductase. | Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. | 0.914 |
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