Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAH41364.1 | hutH | BBR47_03870 | BBR47_21400 | Conserved hypothetical protein; Belongs to the arginase family. | Histidine ammonia-lyase. | 0.636 |
BAH41364.1 | hutI | BBR47_03870 | BBR47_42290 | Conserved hypothetical protein; Belongs to the arginase family. | Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family. | 0.435 |
BAH41364.1 | hutU | BBR47_03870 | BBR47_42300 | Conserved hypothetical protein; Belongs to the arginase family. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.407 |
BAH41364.1 | rocF | BBR47_03870 | BBR47_02630 | Conserved hypothetical protein; Belongs to the arginase family. | Arginase; Belongs to the arginase family. | 0.975 |
BAH45205.1 | hutI | BBR47_42280 | BBR47_42290 | Conserved hypothetical membrane protein. | Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family. | 0.697 |
BAH45205.1 | hutU | BBR47_42280 | BBR47_42300 | Conserved hypothetical membrane protein. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.669 |
BAH45208.1 | hutI | BBR47_42310 | BBR47_42290 | Probable transcriptional regulator. | Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family. | 0.558 |
BAH45208.1 | hutU | BBR47_42310 | BBR47_42300 | Probable transcriptional regulator. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.495 |
hutG | hutH | BBR47_39770 | BBR47_21400 | Putative formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | Histidine ammonia-lyase. | 0.804 |
hutG | hutI | BBR47_39770 | BBR47_42290 | Putative formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family. | 0.968 |
hutG | hutU | BBR47_39770 | BBR47_42300 | Putative formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.688 |
hutG | speB | BBR47_39770 | BBR47_55070 | Putative formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | Agmatinase; Belongs to the arginase family. | 0.533 |
hutH | BAH41364.1 | BBR47_21400 | BBR47_03870 | Histidine ammonia-lyase. | Conserved hypothetical protein; Belongs to the arginase family. | 0.636 |
hutH | hutG | BBR47_21400 | BBR47_39770 | Histidine ammonia-lyase. | Putative formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.804 |
hutH | hutI | BBR47_21400 | BBR47_42290 | Histidine ammonia-lyase. | Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family. | 0.988 |
hutH | hutU | BBR47_21400 | BBR47_42300 | Histidine ammonia-lyase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.999 |
hutH | rocF | BBR47_21400 | BBR47_02630 | Histidine ammonia-lyase. | Arginase; Belongs to the arginase family. | 0.640 |
hutH | speB | BBR47_21400 | BBR47_55070 | Histidine ammonia-lyase. | Agmatinase; Belongs to the arginase family. | 0.640 |
hutI | BAH41364.1 | BBR47_42290 | BBR47_03870 | Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family. | Conserved hypothetical protein; Belongs to the arginase family. | 0.435 |
hutI | BAH45205.1 | BBR47_42290 | BBR47_42280 | Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family. | Conserved hypothetical membrane protein. | 0.697 |
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