STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_02595Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)    
Predicted Functional Partners:
DF19_02600
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.968
DF19_14735
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.866
DF19_02605
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.771
DF19_02590
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.605
DF19_13975
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.453
DF19_28140
Preprotein translocase subunit SecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.443
DF19_22980
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.436
DF19_36140
Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.432
DF19_04990
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.422
DF19_14775
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.412
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.