STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_04035Urease subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (570 aa)    
Predicted Functional Partners:
ureA
Urease subunit gamma; UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
DF19_25300
Urease subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
DF19_25315
Urease accessory protein UreG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.991
DF19_25310
Urease accessory protein UreF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.985
DF19_25320
Urease accessory protein ureD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.875
DF19_05600
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.856
DF19_38725
Allantoicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.835
DF19_05780
Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.832
DF19_04040
Agmatine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.795
DF19_04045
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.788
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.