DF19_05855 protein (Streptomyces olindensis)

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

DF19_05855

ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (541 aa)

Predicted Functional Partners:

DF19_17565

0.973

DF19_17420

0.971

DF19_17460

0.971

DF19_17520

0.970

rpsN

0.949

DF19_02055

0.922

DF19_32810

0.921

DF19_17675

0.920

DF19_17505

0.919

DF19_17535

0.919

Your Current Organism:

Streptomyces olindensis

NCBI taxonomy Id: 358823
Other names: S. olindensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DF19_02055	DF19_05855	DF19_02055	DF19_05855	30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
DF19_02055	DF19_17420	DF19_02055	DF19_17420	30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
DF19_02055	DF19_17460	DF19_02055	DF19_17460	30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
DF19_02055	DF19_17505	DF19_02055	DF19_17505	30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
DF19_02055	DF19_17520	DF19_02055	DF19_17520	30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
DF19_02055	DF19_17535	DF19_02055	DF19_17535	30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
DF19_02055	DF19_17565	DF19_02055	DF19_17565	30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
DF19_02055	DF19_17675	DF19_02055	DF19_17675	30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
DF19_02055	DF19_32810	DF19_02055	DF19_32810	30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
DF19_02055	rpsN	DF19_02055	DF19_17570	30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S14; Located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
DF19_05855	DF19_02055	DF19_05855	DF19_02055	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
DF19_05855	DF19_17420	DF19_05855	DF19_17420	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
DF19_05855	DF19_17460	DF19_05855	DF19_17460	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
DF19_05855	DF19_17505	DF19_05855	DF19_17505	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
DF19_05855	DF19_17520	DF19_05855	DF19_17520	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.970
DF19_05855	DF19_17535	DF19_05855	DF19_17535	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
DF19_05855	DF19_17565	DF19_05855	DF19_17565	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
DF19_05855	DF19_17675	DF19_05855	DF19_17675	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.920
DF19_05855	DF19_32810	DF19_05855	DF19_32810	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
DF19_05855	rpsN	DF19_05855	DF19_17570	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S14; Located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949