STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_23935LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)    
Predicted Functional Partners:
DF19_05985
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.925
DF19_12685
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.917
DF19_30295
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.880
DF19_03900
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.831
DF19_10715
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.831
DF19_24550
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.831
DF19_12015
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.811
DF19_04365
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.715
DF19_13935
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.704
DF19_17175
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.700
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.