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CN09_00010 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_00010" - Aminomethyltransferase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
CN09_00010Aminomethyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the GcvT family (377 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family (954 aa)
  0.998
CN09_00015
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (201 aa)
 
     
  0.988
CN09_00020
Dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (321 aa)
 
     
  0.986
CN09_00025
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (346 aa)
 
     
  0.982
CN09_00030
Potassium transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (445 aa)
 
     
  0.970
CN09_07805
E3 component of alpha keto acid dehydrogenase complexes LpdC; forms a homodimer; binds one molecule of FAD monomer; catalyzes NAD+-dependent oxidation of dihydrolipoyl cofactors that are covalently linked to the E2 component; Derived by automated computational analysis using gene prediction method- Protein Homology (481 aa)
 
 
  0.929
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein (120 aa)
 
  0.918
CN09_00045
Amino acid permease; Derived by automated computational analysis using gene prediction method- Protein Homology (594 aa)
 
     
  0.887
CN09_33930
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)
 
        0.810
CN09_33945
Glutamine synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the glutamine synthetase family (435 aa)
 
   
  0.810
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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