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CN09_00090 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_00090" - Ornithine cyclodeaminase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
CN09_00090Ornithine cyclodeaminase; Derived by automated computational analysis using gene prediction method- Protein Homology (334 aa)    
Predicted Functional Partners:
CN09_00085
Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
 
          0.936
CN09_00100
Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method- Protein Homology (499 aa)
 
     
  0.868
CN09_23555
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (972 aa)
 
     
  0.823
CN09_33470
Endoribonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (140 aa)
 
          0.761
CN09_00070
Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (312 aa)
              0.636
CN09_00075
Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)
              0.628
CN09_00080
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (207 aa)
              0.628
CN09_00095
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (295 aa)
              0.620
CN09_00115
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (266 aa)
 
          0.507
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family (1234 aa)
         
  0.465
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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