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CN09_00125 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_00125" - Glycine/betaine ABC transporter ATP-binding protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
CN09_00125Glycine/betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (375 aa)    
Predicted Functional Partners:
CN09_00130
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (214 aa)
 
  0.982
CN09_00135
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (237 aa)
 
  0.981
CN09_00140
Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
 
 
  0.965
CN09_00080
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (207 aa)
 
  0.878
CN09_00075
Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)
 
  0.878
CN09_00095
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (295 aa)
 
  0.861
CN09_01100
Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
 
 
  0.855
CN09_15035
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)
 
  0.853
CN09_15045
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (388 aa)
 
  0.825
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
         
  0.760
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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