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CN09_00180 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_00180" - Dehydrogenase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_00180Dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (336 aa)    
Predicted Functional Partners:
CN09_00205
D-mannonate oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (378 aa)
     
  0.969
CN09_00175
Galactarate dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (507 aa)
 
     
  0.927
CN09_01235
Amidohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (278 aa)
 
     
  0.762
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
         
  0.724
CN09_00185
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (267 aa)
              0.679
CN09_00210
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)
 
 
 
  0.624
CN09_00200
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (227 aa)
              0.593
CN09_23790
Galactarate dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (501 aa)
 
     
  0.552
CN09_00195
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (217 aa)
              0.541
CN09_23770
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (323 aa)
              0.532
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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