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CN09_00210 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_00210" - GntR family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_00210GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)    
Predicted Functional Partners:
CN09_00205
D-mannonate oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (378 aa)
 
     
  0.725
CN09_00180
Dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (336 aa)
 
 
 
  0.624
CN09_00200
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (227 aa)
              0.607
CN09_00175
Galactarate dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (507 aa)
 
          0.574
CN09_00190
Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (242 aa)
              0.556
CN09_00195
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (217 aa)
              0.554
CN09_23780
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (329 aa)
 
          0.508
CN09_00185
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (267 aa)
              0.489
CN09_26425
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (261 aa)
   
          0.462
CN09_23790
Galactarate dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (501 aa)
 
          0.445
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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