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CN09_00450 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_00450" - Beta-mannosidase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_00450Beta-mannosidase; Derived by automated computational analysis using gene prediction method- Protein Homology (823 aa)    
Predicted Functional Partners:
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (324 aa)
           
  0.779
CN09_00455
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (237 aa)
         
  0.774
CN09_24180
Alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method- Protein Homology (502 aa)
 
   
  0.751
CN09_00445
Cellobiose phosphorylase; Derived by automated computational analysis using gene prediction method- Protein Homology (1086 aa)
 
          0.640
CN09_03325
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (422 aa)
 
     
  0.637
CN09_26190
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (643 aa)
 
     
  0.620
CN09_00460
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (400 aa)
         
  0.602
CN09_29200
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (427 aa)
 
     
  0.597
CN09_22605
Sugar ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (425 aa)
 
     
  0.596
CN09_06420
Beta-xylosidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the glycosyl hydrolase 43 family (536 aa)
 
     
  0.596
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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