CN09_00735 protein (Agrobacterium rhizogenes)

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Predicted Interactions

gene neighborhood

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protein homology

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[Homology]

Score

CN09_00735

Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology (716 aa)

Predicted Functional Partners:

CN09_00730

0.925

CN09_00725

0.888

fhuB

0.739

CN09_03280

0.714

CN09_20775

0.687

CN09_00740

0.659

CN09_20770

0.649

tolQ

0.561

CN09_30315

0.555

CN09_03260

0.549

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_00725	CN09_00730	CN09_00725	CN09_00730	Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.875
CN09_00725	CN09_00735	CN09_00725	CN09_00735	Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology	0.888
CN09_00725	CN09_00740	CN09_00725	CN09_00740	Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.660
CN09_00725	CN09_03260	CN09_00725	CN09_03260	Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.489
CN09_00725	CN09_20770	CN09_00725	CN09_20770	Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Iron-hydroxamate transporter ATP-binding subunit; Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.426
CN09_00725	CN09_20775	CN09_00725	CN09_20775	Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Iron siderophore-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.407
CN09_00725	fhuB	CN09_00725	CN09_20780	Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Iron abc transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	0.477
CN09_00730	CN09_00725	CN09_00730	CN09_00725	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.875
CN09_00730	CN09_00735	CN09_00730	CN09_00735	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology	0.925
CN09_00730	CN09_00740	CN09_00730	CN09_00740	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.630
CN09_00730	CN09_20770	CN09_00730	CN09_20770	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Iron-hydroxamate transporter ATP-binding subunit; Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.687
CN09_00730	fhuB	CN09_00730	CN09_20780	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Iron abc transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	0.523
CN09_00735	CN09_00725	CN09_00735	CN09_00725	Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology	Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.888
CN09_00735	CN09_00730	CN09_00735	CN09_00730	Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.925
CN09_00735	CN09_00740	CN09_00735	CN09_00740	Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.659
CN09_00735	CN09_03260	CN09_00735	CN09_03260	Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.549
CN09_00735	CN09_03280	CN09_00735	CN09_03280	Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.714
CN09_00735	CN09_20770	CN09_00735	CN09_20770	Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology	Iron-hydroxamate transporter ATP-binding subunit; Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.649
CN09_00735	CN09_20775	CN09_00735	CN09_20775	Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology	Iron siderophore-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.687
CN09_00735	CN09_30315	CN09_00735	CN09_30315	Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology	Iron dicitrate transport regulator FecR; Derived by automated computational analysis using gene prediction method: Protein Homology	0.555

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