CN09_00735 protein (Agrobacterium rhizogenes)

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gene neighborhood

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protein homology

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Score

CN09_00735

Ligand-gated channel; Derived by automated computational analysis using gene prediction method- Protein Homology (716 aa)

Predicted Functional Partners:

CN09_00730

0.922

CN09_00725

0.887

CN09_20780

0.737

CN09_03280

0.727

CN09_20775

0.677

CN09_00740

0.656

CN09_20770

0.647

CN09_30315

0.546

CN09_20800

0.540

CN09_21480

0.533

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_00725	CN09_00730	Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.871
CN09_00725	CN09_00735	Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Ligand-gated channel; Derived by automated computational analysis using gene prediction method- Protein Homology	0.887
CN09_00725	CN09_00740	Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method- Protein Homology	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.660
CN09_00725	CN09_20770	Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Iron-hydroxamate transporter ATP-binding subunit; Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.432
CN09_00725	CN09_20775	Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Iron siderophore-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.402
CN09_00725	CN09_20780	Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Iron ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	0.480
CN09_00730	CN09_00725	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.871
CN09_00730	CN09_00735	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Ligand-gated channel; Derived by automated computational analysis using gene prediction method- Protein Homology	0.922
CN09_00730	CN09_00740	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.629
CN09_00730	CN09_20770	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Iron-hydroxamate transporter ATP-binding subunit; Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.678
CN09_00730	CN09_20780	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Iron ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	0.488
CN09_00735	CN09_00725	Ligand-gated channel; Derived by automated computational analysis using gene prediction method- Protein Homology	Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.887
CN09_00735	CN09_00730	Ligand-gated channel; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.922
CN09_00735	CN09_00740	Ligand-gated channel; Derived by automated computational analysis using gene prediction method- Protein Homology	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.656
CN09_00735	CN09_03280	Ligand-gated channel; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.727
CN09_00735	CN09_20770	Ligand-gated channel; Derived by automated computational analysis using gene prediction method- Protein Homology	Iron-hydroxamate transporter ATP-binding subunit; Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.647
CN09_00735	CN09_20775	Ligand-gated channel; Derived by automated computational analysis using gene prediction method- Protein Homology	Iron siderophore-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.677
CN09_00735	CN09_20780	Ligand-gated channel; Derived by automated computational analysis using gene prediction method- Protein Homology	Iron ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	0.737
CN09_00735	CN09_20800	Ligand-gated channel; Derived by automated computational analysis using gene prediction method- Protein Homology	Esterase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.540
CN09_00735	CN09_21480	Ligand-gated channel; Derived by automated computational analysis using gene prediction method- Protein Homology	Side tail fiber protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.533