Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CN09_00725 | CN09_00730 | Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.875 |
CN09_00725 | CN09_00735 | Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.888 |
CN09_00725 | CN09_00740 | Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.660 |
CN09_00730 | CN09_00725 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.875 |
CN09_00730 | CN09_00735 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.925 |
CN09_00730 | CN09_00740 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.630 |
CN09_00735 | CN09_00725 | Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology | Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.888 |
CN09_00735 | CN09_00730 | Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.925 |
CN09_00735 | CN09_00740 | Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.659 |
CN09_00740 | CN09_00725 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.660 |
CN09_00740 | CN09_00730 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.630 |
CN09_00740 | CN09_00735 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.659 |
CN09_00740 | CN09_07450 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.424 |
CN09_00740 | CN09_20435 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.454 |
CN09_07450 | CN09_00740 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.424 |
CN09_20435 | CN09_00740 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.454 |