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CN09_00770 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_00770" - Uncharacterized protein in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_00770Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family (530 aa)    
Predicted Functional Partners:
CN09_00760
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (455 aa)
          0.994
CN09_00765
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (829 aa)
          0.992
CN09_10050
Acyl CoA-acyl carrier protein transacylase; Derived by automated computational analysis using gene prediction method- Protein Homology (377 aa)
   
  0.948
CN09_00800
Antibiotic synthesis protein MbtH; Derived by automated computational analysis using gene prediction method- Protein Homology (81 aa)
 
 
  0.912
CN09_00785
Triostin synthetase I; Derived by automated computational analysis using gene prediction method- Protein Homology (550 aa)
 
   
0.873
CN09_20810
Phosphopantetheinyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the P-Pant transferase superfamily (240 aa)
 
 
 
  0.667
CN09_00755
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1363 aa)
 
       
0.629
CN09_00805
L-lysine 6-monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (456 aa)
 
   
  0.598
CN09_20875
Glutamate-1-semialdehyde aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (410 aa)
       
  0.586
CN09_10720
Malonyl CoA-acyl carrier protein transacylase; Derived by automated computational analysis using gene prediction method- Protein Homology (313 aa)
       
  0.552
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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