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CN09_01120 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_01120" - Fatty acid desaturase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_01120Fatty acid desaturase; Derived by automated computational analysis using gene prediction method- Protein Homology (308 aa)    
Predicted Functional Partners:
CN09_01125
Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (269 aa)
 
          0.946
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family (1234 aa)
         
  0.729
CN09_04750
Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1258 aa)
         
  0.496
CN09_01115
Monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (444 aa)
              0.491
CN09_03645
Methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (528 aa)
   
          0.462
CN09_32255
NADH oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (341 aa)
   
   
  0.418
CN09_25815
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (348 aa)
 
          0.403
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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