CN09_01230 protein (Agrobacterium rhizogenes)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

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protein homology

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[Homology]

Score

CN09_01230

Amine oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (181 aa)

Predicted Functional Partners:

CN09_01225

0.955

CN09_01290

0.932

CN09_01280

0.871

CN09_01235

0.869

CN09_03380

0.857

CN09_01245

0.829

polA

0.780

CN09_01240

0.768

CN09_02590

0.752

CN09_01270

0.686

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01225	CN09_01230	CN09_01225	CN09_01230	Acyl-CoA transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Amine oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.955
CN09_01225	CN09_01235	CN09_01225	CN09_01235	Acyl-CoA transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Amidohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.843
CN09_01225	CN09_01240	CN09_01225	CN09_01240	Acyl-CoA transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.791
CN09_01225	CN09_01245	CN09_01225	CN09_01245	Acyl-CoA transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.696
CN09_01225	CN09_01270	CN09_01225	CN09_01270	Acyl-CoA transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.591
CN09_01225	CN09_01280	CN09_01225	CN09_01280	Acyl-CoA transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.779
CN09_01225	CN09_01290	CN09_01225	CN09_01290	Acyl-CoA transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.841
CN09_01230	CN09_01225	CN09_01230	CN09_01225	Amine oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Acyl-CoA transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.955
CN09_01230	CN09_01235	CN09_01230	CN09_01235	Amine oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Amidohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.869
CN09_01230	CN09_01240	CN09_01230	CN09_01240	Amine oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.768
CN09_01230	CN09_01245	CN09_01230	CN09_01245	Amine oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.829
CN09_01230	CN09_01270	CN09_01230	CN09_01270	Amine oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.686
CN09_01230	CN09_01280	CN09_01230	CN09_01280	Amine oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.871
CN09_01230	CN09_01290	CN09_01230	CN09_01290	Amine oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.932
CN09_01230	CN09_02590	CN09_01230	CN09_02590	Amine oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Acyl-CoA transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.752
CN09_01230	CN09_03380	CN09_01230	CN09_03380	Amine oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.857
CN09_01230	polA	CN09_01230	CN09_13050	Amine oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.780
CN09_01235	CN09_01225	CN09_01235	CN09_01225	Amidohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Acyl-CoA transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.843
CN09_01235	CN09_01230	CN09_01235	CN09_01230	Amidohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Amine oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.869
CN09_01235	CN09_01240	CN09_01235	CN09_01240	Amidohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.887

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