CN09_01355 protein (Agrobacterium rhizogenes)

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second shell of interactors

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gene neighborhood

gene fusions

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co-expression

protein homology

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Score

CN09_01355

Protein iolH; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)

Predicted Functional Partners:

CN09_01360

0.999

CN09_01365

0.905

CN09_01350

0.849

CN09_34410

0.829

CN09_20990

0.753

CN09_21015

0.725

CN09_20985

0.714

CN09_23640

0.656

CN09_34405

0.620

CN09_11595

0.595

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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node1	node2	node1 annotation	node2 annotation	score
CN09_01350	CN09_01355	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Protein iolH; Derived by automated computational analysis using gene prediction method- Protein Homology	0.849
CN09_01350	CN09_01360	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	AP endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.785
CN09_01350	CN09_01365	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.712
CN09_01350	CN09_20990	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.457
CN09_01355	CN09_01350	Protein iolH; Derived by automated computational analysis using gene prediction method- Protein Homology	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.849
CN09_01355	CN09_01360	Protein iolH; Derived by automated computational analysis using gene prediction method- Protein Homology	AP endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_01355	CN09_01365	Protein iolH; Derived by automated computational analysis using gene prediction method- Protein Homology	Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.905
CN09_01355	CN09_11595	Protein iolH; Derived by automated computational analysis using gene prediction method- Protein Homology	5-deoxyglucuronate isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.595
CN09_01355	CN09_20985	Protein iolH; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.714
CN09_01355	CN09_20990	Protein iolH; Derived by automated computational analysis using gene prediction method- Protein Homology	Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.753
CN09_01355	CN09_21015	Protein iolH; Derived by automated computational analysis using gene prediction method- Protein Homology	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.725
CN09_01355	CN09_23640	Protein iolH; Derived by automated computational analysis using gene prediction method- Protein Homology	Xylose isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.656
CN09_01355	CN09_34405	Protein iolH; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.620
CN09_01355	CN09_34410	Protein iolH; Derived by automated computational analysis using gene prediction method- Protein Homology	Myo-inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.829
CN09_01360	CN09_01350	AP endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.785
CN09_01360	CN09_01355	AP endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology	Protein iolH; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_01360	CN09_01365	AP endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology	Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.972
CN09_01360	CN09_11595	AP endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology	5-deoxyglucuronate isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.931
CN09_01360	CN09_20985	AP endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.705
CN09_01360	CN09_20990	AP endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology	Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.849