CN09_01355 protein (Agrobacterium rhizogenes)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

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[Homology]

Score

CN09_01355

Protein iolH; Derived by automated computational analysis using gene prediction method: Protein Homology (304 aa)

Predicted Functional Partners:

CN09_01360

0.999

CN09_01365

0.904

CN09_01350

0.849

CN09_34410

0.828

CN09_20990

0.751

CN09_21015

0.732

CN09_20985

0.720

CN09_23640

0.656

CN09_34405

0.628

iolB

0.598

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01350	CN09_01355	CN09_01350	CN09_01355	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	Protein iolH; Derived by automated computational analysis using gene prediction method: Protein Homology	0.849
CN09_01350	CN09_01360	CN09_01350	CN09_01360	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.784
CN09_01350	CN09_01365	CN09_01350	CN09_01365	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.717
CN09_01350	CN09_20990	CN09_01350	CN09_20990	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.466
CN09_01355	CN09_01350	CN09_01355	CN09_01350	Protein iolH; Derived by automated computational analysis using gene prediction method: Protein Homology	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.849
CN09_01355	CN09_01360	CN09_01355	CN09_01360	Protein iolH; Derived by automated computational analysis using gene prediction method: Protein Homology	AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.999
CN09_01355	CN09_01365	CN09_01355	CN09_01365	Protein iolH; Derived by automated computational analysis using gene prediction method: Protein Homology	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.904
CN09_01355	CN09_20985	CN09_01355	CN09_20985	Protein iolH; Derived by automated computational analysis using gene prediction method: Protein Homology	Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.720
CN09_01355	CN09_20990	CN09_01355	CN09_20990	Protein iolH; Derived by automated computational analysis using gene prediction method: Protein Homology	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.751
CN09_01355	CN09_21015	CN09_01355	CN09_21015	Protein iolH; Derived by automated computational analysis using gene prediction method: Protein Homology	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.732
CN09_01355	CN09_23640	CN09_01355	CN09_23640	Protein iolH; Derived by automated computational analysis using gene prediction method: Protein Homology	Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.656
CN09_01355	CN09_34405	CN09_01355	CN09_34405	Protein iolH; Derived by automated computational analysis using gene prediction method: Protein Homology	Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.628
CN09_01355	CN09_34410	CN09_01355	CN09_34410	Protein iolH; Derived by automated computational analysis using gene prediction method: Protein Homology	Myo-inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.828
CN09_01355	iolB	CN09_01355	CN09_11595	Protein iolH; Derived by automated computational analysis using gene prediction method: Protein Homology	5-deoxyglucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.598
CN09_01360	CN09_01350	CN09_01360	CN09_01350	AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.784
CN09_01360	CN09_01355	CN09_01360	CN09_01355	AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology	Protein iolH; Derived by automated computational analysis using gene prediction method: Protein Homology	0.999
CN09_01360	CN09_01365	CN09_01360	CN09_01365	AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.972
CN09_01360	CN09_20985	CN09_01360	CN09_20985	AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology	Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.705
CN09_01360	CN09_20990	CN09_01360	CN09_20990	AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.848
CN09_01360	CN09_21015	CN09_01360	CN09_21015	AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.680

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