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CN09_01445 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_01445" - ABC transporter substrate-binding protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_01445ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (315 aa)    
Predicted Functional Partners:
CN09_01440
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (337 aa)
 
     
  0.975
CN09_01430
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (341 aa)
 
     
  0.836
CN09_01450
AP endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (351 aa)
 
          0.730
CN09_01435
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (507 aa)
 
 
 
  0.713
CN09_01455
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (395 aa)
 
     
  0.589
CN09_07590
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (342 aa)
 
     
  0.580
xylA
Xylose isomerase; Catalyzes the interconversion of D-xylose to D-xylulose; Derived by automated computational analysis using gene prediction method- Protein Homology (436 aa)
         
  0.559
CN09_07585
ABC transporter permease; Membrane component of a putative sugar ABC transporter system; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (322 aa)
 
     
  0.558
CN09_34445
AP endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (353 aa)
 
          0.527
CN09_32910
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (329 aa)
 
     
  0.484
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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