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CN09_01660 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_01660" - Sarcosine oxidase subunit gamma in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
CN09_01660Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method- Protein Homology (182 aa)    
Predicted Functional Partners:
CN09_01640
Sarcosine oxidase subunit beta; Derived by automated computational analysis using gene prediction method- Protein Homology (417 aa)
 
 
 
  0.994
CN09_01650
Sarcosine oxidase subunit delta; Derived by automated computational analysis using gene prediction method- Protein Homology (121 aa)
 
 
 
  0.991
CN09_01655
Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the GcvT family (997 aa)
 
 
 
  0.987
CN09_01645
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (139 aa)
              0.942
CN09_03015
Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the GcvT family (985 aa)
 
 
 
  0.917
CN09_33905
Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the GcvT family (977 aa)
 
 
 
  0.916
CN09_03005
Sarcosine oxidase subunit beta; Derived by automated computational analysis using gene prediction method- Protein Homology (417 aa)
 
 
 
  0.858
CN09_33915
Sarcosine oxidase subunit beta; Derived by automated computational analysis using gene prediction method- Protein Homology (416 aa)
 
 
 
  0.856
CN09_03010
Sarcosine oxidase subunit delta; Derived by automated computational analysis using gene prediction method- Protein Homology (91 aa)
 
 
 
  0.845
CN09_33910
Sarcosine oxidase subunit delta; Derived by automated computational analysis using gene prediction method- Protein Homology (92 aa)
 
 
 
  0.844
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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