CN09_01705 protein (Agrobacterium rhizogenes)

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

co-expression

protein homology

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[Homology]

Score

CN09_01705

Transglutaminase; Derived by automated computational analysis using gene prediction method- Protein Homology (294 aa)

Predicted Functional Partners:

CN09_01710

0.991

CN09_01715

0.964

CN09_03620

0.915

CN09_03615

0.909

CN09_16960

0.793

guaA

0.784

CN09_17085

0.642

CN09_01700

0.587

CN09_12395

0.580

cpsB

0.519

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01700	CN09_01705	CN09_01700	CN09_01705	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Transglutaminase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.587
CN09_01700	CN09_01710	CN09_01700	CN09_01710	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.586
CN09_01700	CN09_01715	CN09_01700	CN09_01715	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	IMP dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.575
CN09_01705	CN09_01700	CN09_01705	CN09_01700	Transglutaminase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.587
CN09_01705	CN09_01710	CN09_01705	CN09_01710	Transglutaminase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.991
CN09_01705	CN09_01715	CN09_01705	CN09_01715	Transglutaminase; Derived by automated computational analysis using gene prediction method- Protein Homology	IMP dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.964
CN09_01705	CN09_03615	CN09_01705	CN09_03615	Transglutaminase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.909
CN09_01705	CN09_03620	CN09_01705	CN09_03620	Transglutaminase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.915
CN09_01705	CN09_12395	CN09_01705	CN09_12395	Transglutaminase; Derived by automated computational analysis using gene prediction method- Protein Homology	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.580
CN09_01705	CN09_16960	CN09_01705	CN09_16960	Transglutaminase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.793
CN09_01705	CN09_17085	CN09_01705	CN09_17085	Transglutaminase; Derived by automated computational analysis using gene prediction method- Protein Homology	Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the PEP-utilizing enzyme family	0.642
CN09_01705	cpsB	CN09_01705	CN09_01720	Transglutaminase; Derived by automated computational analysis using gene prediction method- Protein Homology	Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family	0.519
CN09_01705	guaA	CN09_01705	CN09_14055	Transglutaminase; Derived by automated computational analysis using gene prediction method- Protein Homology	GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP	0.784
CN09_01710	CN09_01700	CN09_01710	CN09_01700	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.586
CN09_01710	CN09_01705	CN09_01710	CN09_01705	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Transglutaminase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.991
CN09_01710	CN09_01715	CN09_01710	CN09_01715	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	IMP dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_01710	CN09_03615	CN09_01710	CN09_03615	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.931
CN09_01710	CN09_03620	CN09_01710	CN09_03620	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.741
CN09_01710	CN09_16960	CN09_01710	CN09_16960	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.989
CN09_01710	cpsB	CN09_01710	CN09_01720	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family	0.624

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