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CN09_01770 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_01770" - Lysophospholipase in Agrobacterium rhizogenes
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_01770Lysophospholipase; Derived by automated computational analysis using gene prediction method- Protein Homology (324 aa)    
Predicted Functional Partners:
CN09_16295
Patatin; Derived by automated computational analysis using gene prediction method- Protein Homology (288 aa)
   
   
  0.847
CN09_07075
Patatin; Derived by automated computational analysis using gene prediction method- Protein Homology (321 aa)
   
   
  0.847
CN09_01800
Molecular chaperone; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the small heat shock protein (HSP20) family (154 aa)
 
     
  0.815
CN09_02050
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (209 aa)
 
 
      0.803
CN09_29405
Helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (1053 aa)
 
          0.801
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
         
  0.769
CN09_13490
Peptidase; Derived by automated computational analysis using gene prediction method- Protein Homology (170 aa)
 
          0.753
CN09_29400
RNA-binding protein S4; Derived by automated computational analysis using gene prediction method- Protein Homology (134 aa)
              0.732
CN09_29395
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions (112 aa)
              0.723
CN09_13495
Pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method- Protein Homology (270 aa)
              0.707
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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