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CN09_01805 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_01805" - Uncharacterized protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_01805Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (339 aa)    
Predicted Functional Partners:
CN09_06240
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (535 aa)
              0.999
CN09_34470
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the aldehyde dehydrogenase family (476 aa)
              0.992
CN09_01810
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (285 aa)
 
          0.920
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (520 aa)
              0.882
CN09_18390
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1499 aa)
              0.832
CN09_02265
Lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (869 aa)
              0.780
CN09_32770
Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (529 aa)
         
  0.747
CN09_18960
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1011 aa)
         
  0.706
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5’-phosphoribosyl)-anthranilate (PRA) (338 aa)
              0.652
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate; Belongs to the pantothenate synthetase family (291 aa)
              0.652
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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