CN09_01855 protein (Agrobacterium rhizogenes)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

CN09_01855

Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (500 aa)

Predicted Functional Partners:

CN09_01860

0.958

CN09_23675

0.846

CN09_24525

0.846

CN09_10210

0.808

CN09_27330

0.797

CN09_10215

0.791

CN09_10220

0.789

cpsB

0.788

CN09_06795

0.768

CN09_15085

0.766

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01855	CN09_01860	CN09_01855	CN09_01860	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	0.958
CN09_01855	CN09_06795	CN09_01855	CN09_06795	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.768
CN09_01855	CN09_10210	CN09_01855	CN09_10210	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Cellulose biosynthesis protein CelD; Derived by automated computational analysis using gene prediction method- Protein Homology	0.808
CN09_01855	CN09_10215	CN09_01855	CN09_10215	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Chain-length determining protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.791
CN09_01855	CN09_10220	CN09_01855	CN09_10220	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.789
CN09_01855	CN09_15085	CN09_01855	CN09_15085	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Regulatory protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.766
CN09_01855	CN09_23675	CN09_01855	CN09_23675	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Chain-length determining protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.846
CN09_01855	CN09_24525	CN09_01855	CN09_24525	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.846
CN09_01855	CN09_27330	CN09_01855	CN09_27330	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.797
CN09_01855	cpsB	CN09_01855	CN09_01720	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family	0.788
CN09_01860	CN09_01855	CN09_01860	CN09_01855	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.958
CN09_01860	CN09_10220	CN09_01860	CN09_10220	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.519
CN09_01860	CN09_23675	CN09_01860	CN09_23675	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	Chain-length determining protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.715
CN09_01860	CN09_24525	CN09_01860	CN09_24525	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.715
CN09_01860	cpsB	CN09_01860	CN09_01720	D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily	Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family	0.999
CN09_06795	CN09_01855	CN09_06795	CN09_01855	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.768
CN09_06795	CN09_10210	CN09_06795	CN09_10210	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Cellulose biosynthesis protein CelD; Derived by automated computational analysis using gene prediction method- Protein Homology	0.678
CN09_06795	CN09_10215	CN09_06795	CN09_10215	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Chain-length determining protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.529
CN09_06795	CN09_15085	CN09_06795	CN09_15085	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Regulatory protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.775
CN09_06795	CN09_27330	CN09_06795	CN09_27330	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.659

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