STRINGSTRING
CN09_01970 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_01970" - Ubiquinol oxidase subunit 2 in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_01970Ubiquinol oxidase subunit 2; Derived by automated computational analysis using gene prediction method- Protein Homology (374 aa)    
Predicted Functional Partners:
CN09_12990
Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the heme-copper respiratory oxidase family (667 aa)
 
  0.979
CN09_12980
Cytochrome O ubiquinol oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (133 aa)
 
 
  0.976
CN09_12985
Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method- Protein Homology (209 aa)
 
 
  0.975
CN09_16835
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (564 aa)
 
  0.925
CN09_20180
Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the heme-copper respiratory oxidase family (592 aa)
 
  0.921
CN09_04190
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (424 aa)
   
 
  0.893
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily (319 aa)
 
 
  0.891
CN09_16855
Cytochrome B562; Derived by automated computational analysis using gene prediction method- Protein Homology (292 aa)
 
 
  0.880
CN09_20190
Bb3-type cytochrome oxidase subunit IV; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
   
 
  0.872
CN09_01975
Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology (192 aa)
              0.866
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
Server load: low (5%) [HD]