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CN09_01995 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_01995" - Alkaline phosphatase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_01995Alkaline phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (101 aa)    
Predicted Functional Partners:
CN09_02000
N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (265 aa)
              0.946
CN09_16470
Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin (184 aa)
 
          0.848
CN09_01990
UPF0335 protein CN09_01990; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0335 family (84 aa)
              0.839
CN09_02010
Pyruvate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the pyruvate kinase family (479 aa)
              0.836
CN09_02005
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (162 aa)
              0.836
rnd
Ribonuclease D; Exonuclease involved in the 3’ processing of various precursor tRNAs. Initiates hydrolysis at the 3’-terminus of an RNA molecule and releases 5’-mononucleotides; Belongs to the RNase D family (381 aa)
 
          0.718
CN09_01180
CysZ-like protein; Role in sulfur assimilation; Derived by automated computational analysis using gene prediction method- Protein Homology (237 aa)
              0.712
CN09_10550
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family (255 aa)
              0.652
CN09_09895
DNA-directed DNA polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology (1165 aa)
              0.644
fabZ
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs (157 aa)
              0.585
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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