CN09_02020 protein (Agrobacterium rhizogenes)

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Score

CN09_02020

Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method- Protein Homology (323 aa)

Predicted Functional Partners:

CN09_01825

0.870

CN09_16300

0.778

CN09_15290

0.772

greA

0.747

CN09_11050

0.744

CN09_23990

0.740

CN09_13665

0.725

ate

0.724

lon

0.722

carB

0.704

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01825	CN09_02020	CN09_01825	CN09_02020	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.870
CN09_01825	CN09_15290	CN09_01825	CN09_15290	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.837
CN09_01825	CN09_16300	CN09_01825	CN09_16300	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	0.999
CN09_01825	carB	CN09_01825	CN09_04455	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Carbamoyl-phosphate synthase large chain; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the CarB family	0.999
CN09_01825	greA	CN09_01825	CN09_04450	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreA releases sequences of 2 to 3 nucleotides	0.452
CN09_01825	lon	CN09_01825	CN09_10090	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner	0.730
CN09_02020	CN09_01825	CN09_02020	CN09_01825	Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method- Protein Homology	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.870
CN09_02020	CN09_11050	CN09_02020	CN09_11050	Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method- Protein Homology	Hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744
CN09_02020	CN09_13665	CN09_02020	CN09_13665	Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method- Protein Homology	Alanine racemase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.725
CN09_02020	CN09_15290	CN09_02020	CN09_15290	Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.772
CN09_02020	CN09_16300	CN09_02020	CN09_16300	Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method- Protein Homology	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	0.778
CN09_02020	CN09_23990	CN09_02020	CN09_23990	Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method- Protein Homology	3-carboxy-cis,cis-muconate cycloisomerase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.740
CN09_02020	ate	CN09_02020	CN09_10420	Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method- Protein Homology	Putative arginyl-tRNA--protein transferase; May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate	0.724
CN09_02020	carB	CN09_02020	CN09_04455	Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method- Protein Homology	Carbamoyl-phosphate synthase large chain; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the CarB family	0.704
CN09_02020	greA	CN09_02020	CN09_04450	Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method- Protein Homology	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreA releases sequences of 2 to 3 nucleotides	0.747
CN09_02020	lon	CN09_02020	CN09_10090	Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method- Protein Homology	Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner	0.722
CN09_11050	CN09_02020	CN09_11050	CN09_02020	Hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744
CN09_11050	CN09_23990	CN09_11050	CN09_23990	Hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	3-carboxy-cis,cis-muconate cycloisomerase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.592
CN09_13665	CN09_02020	CN09_13665	CN09_02020	Alanine racemase; Derived by automated computational analysis using gene prediction method- Protein Homology	Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.725
CN09_15290	CN09_01825	CN09_15290	CN09_01825	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.837

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