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CN09_02440 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_02440" - HEAT resistant agglutinin 1 protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_02440HEAT resistant agglutinin 1 protein; Derived by automated computational analysis using gene prediction method- Protein Homology (284 aa)    
Predicted Functional Partners:
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family (450 aa)
         
  0.731
CN09_02455
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (392 aa)
              0.718
CN09_01855
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (500 aa)
   
          0.712
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (367 aa)
   
        0.709
CN09_27580
Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
 
     
  0.682
CN09_27330
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (423 aa)
 
        0.646
CN09_13505
Pilus assembly protein; Derived by automated computational analysis using gene prediction method- Protein Homology (235 aa)
   
          0.639
CN09_07155
Phospholipase; Derived by automated computational analysis using gene prediction method- Protein Homology (298 aa)
 
     
  0.635
CN09_16990
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)
   
          0.626
CN09_07055
Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method- Protein Homology (209 aa)
   
          0.621
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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