CN09_02450 protein (Agrobacterium rhizogenes)

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second shell of interactors

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gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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Score

CN09_02450

Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (250 aa)

Predicted Functional Partners:

CN09_12660

0.888

CN09_05180

0.697

CN09_02385

0.680

CN09_15710

0.670

CN09_10280

0.664

CN09_20310

0.660

CN09_27105

0.655

CN09_33960

0.653

CN09_01945

0.638

CN09_29690

0.605

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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node1	node2	node1 annotation	node2 annotation	score
CN09_01945	CN09_02385	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.423
CN09_01945	CN09_02450	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.638
CN09_01945	CN09_05180	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.410
CN09_01945	CN09_10280	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.592
CN09_01945	CN09_12660	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.527
CN09_01945	CN09_15710	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Succinoglycan biosynthesis protein exop; Derived by automated computational analysis using gene prediction method- Protein Homology	0.496
CN09_01945	CN09_20310	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	0.495
CN09_01945	CN09_27105	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	0.509
CN09_01945	CN09_33960	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	0.499
CN09_02385	CN09_01945	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.423
CN09_02385	CN09_02450	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.680
CN09_02385	CN09_05180	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.724
CN09_02385	CN09_10280	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.738
CN09_02385	CN09_12660	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.718
CN09_02385	CN09_15710	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Succinoglycan biosynthesis protein exop; Derived by automated computational analysis using gene prediction method- Protein Homology	0.688
CN09_02385	CN09_20310	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	0.610
CN09_02385	CN09_27105	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	0.596
CN09_02385	CN09_29690	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+	0.642
CN09_02385	CN09_33960	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	0.595
CN09_02450	CN09_01945	Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.638