CN09_02580 protein (Agrobacterium rhizogenes)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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Score

CN09_02580

Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)

Predicted Functional Partners:

CN09_03245

0.760

CN09_07255

0.759

CN09_33975

0.755

CN09_18865

0.743

CN09_17095

0.742

CN09_08975

0.729

CN09_11615

0.716

CN09_03240

0.694

CN09_02660

0.685

CN09_23855

0.673

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_02580	CN09_02660	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.685
CN09_02580	CN09_03240	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.694
CN09_02580	CN09_03245	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.760
CN09_02580	CN09_07255	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.759
CN09_02580	CN09_08975	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	3-deoxy-manno-octulosonate cytidylyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.729
CN09_02580	CN09_11615	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method- Protein Homology	0.716
CN09_02580	CN09_17095	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.742
CN09_02580	CN09_18865	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+	0.743
CN09_02580	CN09_23855	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.673
CN09_02580	CN09_33975	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.755
CN09_02660	CN09_02580	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.685
CN09_02660	CN09_08975	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	3-deoxy-manno-octulosonate cytidylyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.404
CN09_02660	CN09_23855	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.657
CN09_03240	CN09_02580	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.694
CN09_03240	CN09_03245	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.974
CN09_03240	CN09_07255	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.692
CN09_03240	CN09_08975	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	3-deoxy-manno-octulosonate cytidylyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.465
CN09_03240	CN09_11615	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method- Protein Homology	0.586
CN09_03240	CN09_17095	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.623
CN09_03240	CN09_18865	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+	0.654