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CN09_02805 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_02805" - FAD-dependent oxidoreductase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
CN09_02805FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (513 aa)    
Predicted Functional Partners:
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate (453 aa)
   
   
  0.781
CN09_20820
2-keto-4-pentenoate hydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (341 aa)
 
   
  0.775
CN09_20815
Maleylacetoacetate isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (210 aa)
     
 
  0.775
CN09_02340
Damage-inducible protein DinB; Derived by automated computational analysis using gene prediction method- Protein Homology (187 aa)
              0.707
CN09_32515
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (168 aa)
         
  0.700
CN09_10375
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (369 aa)
   
        0.657
CN09_33180
Amidohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (333 aa)
 
   
  0.618
CN09_18805
Amidohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (333 aa)
 
   
  0.617
ung
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (233 aa)
   
        0.614
CN09_30360
3-beta hydroxysteroid dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
 
 
  0.612
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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