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CN09_02865 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_02865" - NAD(P)H dehydrogenase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
CN09_02865NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (193 aa)    
Predicted Functional Partners:
CN09_02870
FAD-linked oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (469 aa)
 
          0.984
CN09_16300
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family (606 aa)
     
 
  0.978
CN09_02875
Cytosine deaminase; Derived by automated computational analysis using gene prediction method- Protein Homology (437 aa)
 
          0.976
CN09_02880
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (288 aa)
 
          0.933
CN09_02890
Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (338 aa)
 
          0.925
CN09_02885
Nitrate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (274 aa)
 
          0.925
CN09_11755
Electron transfer flavoprotein-ubiquinone oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (554 aa)
              0.701
CN09_13995
NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (265 aa)
 
       
0.685
CN09_02840
Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method- Protein Homology (130 aa)
 
          0.680
CN09_02900
Creatininase; Derived by automated computational analysis using gene prediction method- Protein Homology (265 aa)
 
          0.563
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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