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CN09_02910 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_02910" - UDP-glucuronate 5-epimerase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_02910UDP-glucuronate 5-epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology (334 aa)    
Predicted Functional Partners:
CN09_02915
UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (440 aa)
 
  0.972
CN09_12645
UDP-N-acetyl-D-galactosamine dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (427 aa)
 
  0.962
CN09_30540
UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (473 aa)
 
  0.839
CN09_11685
Family 2 glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (339 aa)
 
 
  0.838
cpsB
Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family (475 aa)
 
   
  0.801
CN09_02255
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (107 aa)
              0.783
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (324 aa)
 
 
0.753
CN09_24560
Cellobiosyl-diphosphoprenyl alpha-mannosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (384 aa)
 
 
  0.752
CN09_13625
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (662 aa)
   
   
  0.745
CN09_08065
Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology (170 aa)
              0.731
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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